PDBsum entry 5cm9 Go to PDB code:  Pore analysis for: 5cm9 calculated with MOLE 2.0 PDB id 5cm9 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 1.68 28.8 -1.47 -0.46 20.6 86 4 2 2 2 0 0 1   2 1.31 1.43 30.1 -1.74 -0.55 20.4 93 5 2 4 2 0 1 0   3 1.07 1.43 47.1 -0.20 -0.07 17.0 86 4 5 1 9 2 0 1   4 1.55 1.94 59.7 -1.45 -0.37 22.4 82 9 4 4 3 0 2 0   5 1.55 1.95 63.7 -1.53 -0.46 22.1 82 8 4 5 5 0 2 0   6 2.29 2.63 66.8 -1.87 -0.49 28.0 82 9 4 3 3 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.