PDBsum entry 5ch3 Go to PDB code:  Tunnel analysis for: 5ch3 calculated with MOLE 2.0 PDB id 5ch3 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.47 27.1 -1.42 -0.01 17.0 77 4 2 2 3 2 0 0   2 1.26 1.48 28.8 -0.64 -0.01 13.6 76 4 3 3 3 2 0 0   3 1.36 2.40 18.4 -1.29 0.52 20.6 67 2 1 0 1 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.