PDBsum entry 5cgf Go to PDB code:  Pore analysis for: 5cgf calculated with MOLE 2.0 PDB id 5cgf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.33 2.33 26.8 -1.69 -0.46 15.6 83 3 4 4 1 1 1 0   2 1.65 2.73 39.3 -1.04 -0.23 16.9 69 3 3 2 2 5 1 0   3 1.35 1.35 53.1 -2.27 -0.36 29.3 81 6 7 3 1 2 1 0   4 1.90 2.13 63.3 -0.79 -0.13 14.1 75 5 8 4 6 5 2 0   5 1.42 1.45 96.3 -1.53 -0.51 20.3 84 8 10 8 8 3 0 0   6 1.38 1.47 106.9 -1.77 -0.32 22.4 83 13 4 6 6 5 0 0   7 1.44 1.45 112.4 -1.28 -0.29 19.7 85 12 7 7 9 5 0 0   8 1.46 1.54 126.5 -1.10 -0.23 16.5 80 9 8 9 11 8 2 0   9 1.61 1.82 126.2 -1.80 -0.40 22.4 81 16 10 6 7 4 0 0   10 1.43 1.45 133.0 -1.63 -0.39 21.6 81 17 9 9 8 8 2 1   11 1.40 1.58 132.0 -2.84 -0.57 31.6 80 15 8 8 3 5 1 0   12 1.40 1.50 132.9 -1.89 -0.38 21.7 80 18 5 10 5 8 2 1   13 1.44 1.44 136.2 -2.31 -0.52 28.3 81 14 12 7 6 5 1 0   14 1.69 2.11 138.5 -1.81 -0.44 21.3 79 18 10 9 5 6 2 1   15 1.79 2.79 141.8 -2.63 -0.58 29.1 79 16 13 7 3 3 1 0   16 1.45 1.51 146.0 -1.51 -0.39 20.3 84 11 9 9 10 7 0 0   17 1.71 1.91 151.6 -1.77 -0.46 20.3 82 13 10 9 6 5 0 0   18 1.22 1.38 165.6 -1.50 -0.39 15.1 84 10 5 14 9 7 1 1   19 1.25 1.34 175.3 -1.39 -0.40 14.5 84 11 10 13 9 5 1 1   20 1.40 1.58 195.3 -2.44 -0.42 26.0 84 21 5 14 3 10 0 0   21 1.39 1.54 196.2 -2.03 -0.40 20.4 83 18 4 16 6 9 1 1   22 1.44 1.44 199.4 -2.09 -0.40 24.4 84 20 9 13 7 10 0 0   23 1.47 1.57 200.3 -1.71 -0.38 19.1 84 17 8 15 10 9 1 1   24 1.39 1.53 200.1 -2.59 -0.51 24.8 82 21 6 13 2 10 0 0   25 1.44 1.44 204.2 -2.25 -0.49 23.2 82 20 10 11 5 10 0 0   26 1.75 2.34 205.9 -1.94 -0.43 19.3 83 19 9 15 6 7 1 1   27 1.93 2.07 205.0 -2.34 -0.43 25.0 83 22 10 13 3 8 0 0   28 1.39 1.59 206.9 -1.95 -0.40 21.8 83 17 7 15 7 10 0 0   29 1.84 1.84 209.8 -2.48 -0.54 23.6 82 22 11 12 2 8 0 0   30 1.52 1.64 216.6 -1.86 -0.43 20.9 82 18 12 14 7 8 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.