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PDBsum entry 5cf6

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protein ligands Protein-protein interface(s) links
Transferase/transferase inhibitor PDB id
5cf6

 

 

 

 

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Contents
Protein chains
287 a.a.
Ligands
50O ×2
Waters ×211
PDB id:
5cf6
Name: Transferase/transferase inhibitor
Title: Crystal structure of janus kinase 2 in complex with n,n-dicyclopropyl- 10-[(2s)-2,3-dihydroxypropyl]-3-methyl-7-(methylamino)-3,5,8,10- tetraazatricyclo [7.3.0.02,6]dodeca-1(9),2(6),4,7,11-pentaene-11- carboxamide
Structure: Tyrosine-protein kinase jak2. Chain: a, b. Fragment: catalytic domain, unp residues 839-1132. Synonym: janus kinase 2,jak-2. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: jak2. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.50Å     R-factor:   0.187     R-free:   0.214
Authors: J.S.Sack
Key ref: A.C.Hart et al. (2015). Structure-Based Design of Selective Janus Kinase 2 Imidazo[4,5-d]pyrrolo[2,3-b]pyridine Inhibitors. Acs Med Chem Lett, 6, 845-849. PubMed id: 26288682 DOI: 10.1021/acsmedchemlett.5b00225
Date:
08-Jul-15     Release date:   26-Aug-15    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
O60674  (JAK2_HUMAN) -  Tyrosine-protein kinase JAK2 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1132 a.a.
287 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.2  - non-specific protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1021/acsmedchemlett.5b00225 Acs Med Chem Lett 6:845-849 (2015)
PubMed id: 26288682  
 
 
Structure-Based Design of Selective Janus Kinase 2 Imidazo[4,5-d]pyrrolo[2,3-b]pyridine Inhibitors.
A.C.Hart, G.M.Schroeder, H.Wan, J.Grebinski, J.Inghrim, J.Kempson, J.Guo, W.J.Pitts, J.S.Tokarski, J.S.Sack, J.A.Khan, J.Lippy, M.V.Lorenzi, D.You, T.McDevitt, R.Vuppugalla, Y.Zhang, L.J.Lombardo, G.L.Trainor, A.V.Purandare.
 
  ABSTRACT  
 
Early hit to lead work on a pyrrolopyridine chemotype provided access to compounds with biochemical and cellular potency against Janus kinase 2 (JAK2). Structure-based drug design along the extended hinge region of JAK2 led to the identification of an important H-bond interaction with the side chain of Tyr 931, which improved JAK family selectivity. The 4,5-dimethyl thiazole analogue 18 demonstrated high levels of JAK family selectivity and was identified as a promising lead for the program.
 

 

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