PDBsum entry 5cf4 Go to PDB code:  Pore analysis for: 5cf4 calculated with MOLE 2.0 PDB id 5cf4 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.47 1.52 35.9 -3.28 -0.70 29.1 83 4 2 5 1 1 1 0   2 2.20 2.93 55.9 -3.31 -0.72 35.0 82 9 5 3 0 0 0 0  PTR 1007 B 3 1.82 3.13 78.2 -1.28 -0.38 22.4 81 9 8 4 6 1 4 0  PTR 1007 A PTR 1008 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.