PDBsum entry 5cf4 Go to PDB code:  Tunnel analysis for: 5cf4 calculated with MOLE 2.0 PDB id 5cf4 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 1.84 19.1 -0.28 -0.23 14.5 77 3 2 1 4 1 0 0  50Y 4000 B 2 1.28 1.64 25.6 0.44 -0.04 11.1 71 2 3 1 6 1 0 0  50Y 4000 B 3 1.17 1.17 28.2 -0.17 -0.31 13.7 79 3 3 1 5 0 0 0  50Y 4000 A 4 1.17 1.16 32.5 0.54 0.06 9.2 70 2 3 1 6 2 0 0  50Y 4000 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.