PDBsum entry 5cer Go to PDB code:  Pore analysis for: 5cer calculated with MOLE 2.0 PDB id 5cer Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.46 2.52 49.4 -2.41 -0.43 32.9 79 9 4 0 5 0 2 0   2 2.55 2.72 49.4 -2.08 -0.73 21.5 89 4 6 6 4 1 0 0   3 3.30 6.17 66.1 -2.75 -0.67 33.1 80 10 7 3 1 0 1 0   4 2.45 2.69 68.2 -2.00 -0.50 26.7 80 9 6 3 6 1 0 0   5 1.27 1.38 70.8 -1.70 -0.50 23.0 84 7 5 2 5 1 2 0   6 2.42 2.51 72.7 -2.36 -0.61 30.0 82 10 7 5 4 0 1 0   7 2.29 3.27 76.8 -2.16 -0.78 25.9 79 10 10 3 2 0 1 0   8 1.27 1.41 76.4 -1.70 -0.60 17.5 85 8 6 6 4 2 0 0   9 2.46 2.52 84.1 -2.57 -0.63 27.8 81 12 6 4 3 1 1 0   10 2.27 5.25 95.8 -2.19 -0.68 28.1 79 11 11 3 4 0 1 0   11 1.54 1.57 100.7 -1.75 -0.67 22.6 92 6 11 10 8 0 0 0   12 2.15 5.57 103.0 -2.29 -0.80 27.9 80 11 15 5 0 0 0 0   13 2.47 2.74 107.7 -1.69 -0.62 18.9 90 8 11 13 5 2 0 0   14 2.62 5.35 111.5 -2.64 -0.72 27.7 80 16 11 7 0 1 1 0   15 1.27 1.28 115.7 -1.55 -0.56 22.2 84 9 10 5 10 1 0 0   16 1.77 3.14 127.7 -1.99 -0.75 24.0 81 10 14 5 3 1 1 0   17 2.47 2.52 123.4 -2.33 -0.55 31.7 81 13 10 3 9 0 1 0   18 1.42 1.64 129.8 -2.32 -0.68 23.2 86 10 13 12 7 0 2 0   19 2.12 3.45 131.2 -2.44 -0.66 23.5 84 13 12 13 6 1 2 0   20 2.75 2.92 129.9 -1.67 -0.45 19.3 87 10 5 8 6 2 0 0   21 1.42 1.64 135.1 -2.08 -0.73 25.8 83 11 15 6 4 0 1 0   22 1.79 1.73 133.5 -2.18 -0.66 22.7 85 10 10 8 7 1 2 0   23 1.42 1.64 137.6 -2.20 -0.67 22.5 87 9 13 12 8 0 2 0   24 2.03 2.55 148.4 -2.77 -0.66 30.9 81 16 10 8 3 0 3 0   25 2.83 2.95 150.8 -2.51 -0.65 31.3 80 17 15 6 6 0 1 0   26 1.87 3.14 160.7 -2.40 -0.72 27.0 82 20 18 11 4 0 2 0   27 2.05 3.02 164.1 -2.34 -0.75 25.8 82 15 18 11 5 0 3 0   28 2.30 3.03 166.5 -2.25 -0.72 25.8 83 17 18 10 5 0 2 0   29 1.63 1.82 169.9 -2.18 -0.77 24.7 83 12 18 10 6 0 3 0   30 1.44 1.50 172.9 -2.46 -0.60 29.4 79 19 12 7 7 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.