PDBsum entry 5cby Go to PDB code:  Pore analysis for: 5cby calculated with MOLE 2.0 PDB id 5cby Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.36 2.35 28.0 -1.28 -0.41 11.3 79 3 0 3 1 1 2 0  DA 10 C DG 11 C DT 14 C DC 9 D DT 10 D DC 11 D 2 1.49 1.60 35.1 -1.24 -0.50 18.1 81 3 1 1 1 0 0 0  DC 1 C DC 2 C DA 3 C DG 4 C DA 5 C DT 14 C DC 9 D DT 10 D DC 11 D DT 14 D DT 15 D DC 16 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.