PDBsum entry 5cbx Go to PDB code:  Tunnel analysis for: 5cbx calculated with MOLE 2.0 PDB id 5cbx Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.55 19.1 -0.04 -0.14 9.8 80 2 1 2 4 0 0 4   2 1.23 1.59 19.7 0.15 -0.08 9.2 80 2 1 2 4 0 0 4   3 1.21 1.50 21.7 0.16 -0.18 7.7 79 1 1 2 4 0 0 4   4 1.23 1.53 22.4 0.47 -0.08 6.3 79 1 1 2 4 0 0 4   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.