PDBsum entry 5cbs Go to PDB code:  Tunnel analysis for: 5cbs calculated with MOLE 2.0 PDB id 5cbs Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.11 1.11 32.4 -0.71 -0.35 13.8 81 3 2 0 6 0 2 0   2 1.13 1.13 37.4 -0.45 -0.35 11.3 82 4 2 2 7 1 1 0   3 1.30 1.30 18.6 -1.41 -0.68 13.3 95 1 2 2 2 0 0 0   4 1.30 1.30 19.6 -1.63 -0.73 18.1 96 1 2 3 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.