PDBsum entry 5cbo Go to PDB code:  Pore analysis for: 5cbo calculated with MOLE 2.0 PDB id 5cbo Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.26 2.43 30.5 -1.74 -0.55 11.2 80 3 2 4 2 2 1 0   2 2.58 4.66 31.7 -2.34 -0.55 35.4 78 4 4 2 0 1 2 0   3 1.88 2.04 34.3 -0.64 0.37 7.0 70 3 1 1 2 9 0 0   4 1.81 2.32 44.1 -1.00 -0.10 9.4 73 4 3 2 2 5 1 0   5 1.98 4.29 48.5 -1.35 -0.11 14.0 75 4 3 3 3 8 0 0   6 1.97 2.38 52.0 -1.11 -0.05 12.2 73 3 4 4 3 10 0 0   7 1.70 2.14 59.0 -1.05 -0.30 11.5 78 2 5 5 4 7 0 0   8 1.50 1.97 58.9 -0.86 0.11 17.0 73 7 3 2 9 6 2 1   9 1.67 2.12 59.3 -1.27 -0.27 12.6 77 5 3 5 2 5 2 0   10 3.32 4.50 65.9 -2.56 -0.73 36.1 79 7 16 4 4 0 3 0   11 1.78 2.16 66.4 -0.96 -0.03 10.5 73 4 5 4 4 12 0 0   12 2.54 3.79 72.8 -1.74 -0.65 17.1 84 4 6 7 4 2 2 0   13 1.44 1.84 76.9 -1.13 -0.35 18.6 78 3 7 4 9 5 0 1   14 1.30 2.12 85.4 -1.91 -0.42 31.3 78 4 6 1 2 1 2 0   15 2.00 4.24 90.9 -1.44 -0.18 17.5 72 12 4 4 5 8 3 0   16 1.93 5.01 92.8 -0.85 -0.23 25.3 80 2 20 4 7 6 1 0   17 2.68 3.03 99.2 -2.44 -0.71 30.6 84 6 18 10 5 0 2 0   18 2.79 2.80 100.6 -2.43 -0.72 30.2 84 7 18 10 5 0 2 0   19 1.40 5.15 103.2 -0.90 -0.23 27.2 78 5 23 0 9 6 2 0   20 1.44 2.21 101.0 -1.68 -0.35 20.7 76 5 4 1 4 3 1 0   21 2.26 3.57 112.0 -1.63 -0.58 16.9 86 6 8 10 7 2 2 0   22 1.76 2.20 116.2 -2.05 -0.40 24.8 77 11 15 11 4 10 2 0   23 1.46 2.01 123.5 -0.57 -0.02 20.9 77 7 18 2 12 13 0 1   24 1.86 2.27 124.2 -1.20 -0.02 11.9 71 14 4 7 4 18 2 0   25 1.50 4.93 129.3 -1.06 -0.30 25.0 82 3 24 7 10 6 1 0   26 1.55 2.19 163.2 -2.09 -0.37 29.7 81 5 10 6 4 4 1 0   27 2.21 2.21 204.9 -1.84 -0.57 21.0 85 9 14 15 9 3 3 0   28 1.81 2.21 209.6 -1.59 -0.33 17.6 78 15 8 8 8 9 3 0   29 1.44 1.90 232.8 -1.40 -0.20 18.1 77 12 13 11 6 11 1 0   30 1.41 1.74 266.0 -1.84 -0.54 21.8 82 17 17 15 9 1 4 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.