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PDBsum entry 5cao

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Transferase/transferase inhibitor PDB id
5cao
Contents
Protein chain
300 a.a.
Ligands
4ZG
Waters ×5

References listed in PDB file
Key reference
Title Noncovalent mutant selective epidermal growth factor receptor inhibitors: a lead optimization case study.
Authors R.Heald, K.K.Bowman, M.C.Bryan, D.Burdick, B.Chan, E.Chan, Y.Chen, S.Clausen, B.Dominguez-Fernandez, C.Eigenbrot, R.Elliott, E.J.Hanan, P.Jackson, J.Knight, H.La, M.Lainchbury, S.Malek, S.Mann, M.Merchant, K.Mortara, H.Purkey, G.Schaefer, S.Schmidt, E.Seward, S.Sideris, L.Shao, S.Wang, K.Yeap, I.Yen, C.Yu, T.P.Heffron.
Ref. J Med Chem, 2015, 58, 8877-8895. [DOI no: 10.1021/acs.jmedchem.5b01412]
PubMed id 26455919
Abstract
Because of their increased activity against activating mutants, first-generation epidermal growth factor receptor (EGFR) kinase inhibitors have had remarkable success in treating non-small-cell lung cancer (NSCLC) patients, but acquired resistance, through a secondary mutation of the gatekeeper residue, means that clinical responses only last for 8-14 months. Addressing this unmet medical need requires agents that can target both of the most common double mutants: T790M/L858R (TMLR) and T790M/del(746-750) (TMdel). Herein we describe how a noncovalent double mutant selective lead compound was optimized using a strategy focused on the structure-guided increase in potency without added lipophilicity or reduction of three-dimensional character. Following successive rounds of design and synthesis it was discovered that cis-fluoro substitution on 4-hydroxy- and 4-methoxypiperidinyl groups provided synergistic, substantial, and specific potency gain through direct interaction with the enzyme and/or effects on the proximal ligand oxygen atom. Further development of the fluorohydroxypiperidine series resulted in the identification of a pair of diastereomers that showed 50-fold enzyme and cell based selectivity for T790M mutants over wild-type EGFR (wtEGFR) in vitro and pathway knock-down in an in vivo xenograft model.
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