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PDBsum entry 5c8s
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Pore analysis for: 5c8s calculated with  MOLE 2.0
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PDB id
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5c8s
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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9 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.81 |
2.79 |
43.8 |
-2.43 |
-0.65 |
28.1 |
81 |
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5 |
6 |
3 |
2 |
0 |
1 |
0 |
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2 |
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1.80 |
2.96 |
62.0 |
-2.68 |
-0.68 |
30.9 |
81 |
8 |
7 |
3 |
2 |
1 |
1 |
0 |
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3 |
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1.22 |
1.38 |
79.9 |
-0.90 |
-0.15 |
21.5 |
79 |
5 |
6 |
3 |
4 |
1 |
2 |
1 |
SAH 605 B
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4 |
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1.62 |
1.82 |
89.1 |
-1.16 |
-0.19 |
17.9 |
77 |
5 |
8 |
5 |
8 |
6 |
3 |
2 |
SAH 605 B SAH 605 D G3A 606 D
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5 |
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1.17 |
1.28 |
101.5 |
-0.97 |
-0.16 |
20.2 |
77 |
7 |
9 |
4 |
9 |
5 |
2 |
2 |
SAH 605 D G3A 606 D
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6 |
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1.22 |
2.58 |
170.8 |
-1.42 |
-0.26 |
21.5 |
75 |
16 |
11 |
9 |
8 |
12 |
3 |
2 |
SAH 605 D G3A 606 D
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7 |
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1.21 |
2.12 |
29.3 |
-1.54 |
-0.49 |
18.8 |
74 |
4 |
4 |
1 |
1 |
2 |
1 |
1 |
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8 |
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2.78 |
2.96 |
38.4 |
-1.66 |
-0.50 |
16.1 |
79 |
2 |
4 |
0 |
1 |
2 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program