PDBsum entry 5c5h Go to PDB code:  Tunnel analysis for: 5c5h calculated with MOLE 2.0 PDB id 5c5h Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.12 2.48 55.1 -1.06 -0.47 15.6 89 6 2 7 5 1 0 0  4YB 502 A 2 1.18 2.47 59.1 -0.98 -0.46 16.5 89 6 3 4 8 1 0 0  4YB 502 A 3 1.19 1.41 79.3 -0.54 -0.30 9.2 83 5 3 6 11 3 3 0  4YB 502 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.