PDBsum entry 5c2e Go to PDB code:  Tunnel analysis for: 5c2e calculated with MOLE 2.0 PDB id 5c2e Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.41 30.6 -1.17 -0.56 12.2 87 2 2 5 5 1 0 0  4PX 803 A 2 1.34 1.39 31.6 0.48 0.17 8.3 72 2 3 1 5 3 1 0  4PX 803 A 3 1.22 1.67 32.4 1.93 0.75 3.4 79 2 0 3 8 5 0 1  4Y1 803 B 4 1.27 1.27 33.0 -0.94 -0.09 15.4 84 3 2 2 3 1 0 1  4PX 803 A 5 1.34 1.36 34.7 -0.13 -0.07 15.5 85 4 3 3 6 1 0 0  4PX 803 A 6 1.34 1.36 36.4 -1.22 -0.55 17.0 88 3 4 6 4 1 0 0  4PX 803 A 7 1.28 1.28 51.5 -0.46 -0.07 14.7 79 3 3 1 6 1 2 1  4PX 803 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.