PDBsum entry 5c1b Go to PDB code:  Pore analysis for: 5c1b calculated with MOLE 2.0 PDB id 5c1b Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 29 pores, coloured by radius 29 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.32 31.0 0.18 -0.08 6.8 77 1 2 2 5 2 2 0  AGS 902 E 2 1.28 1.28 43.6 -1.11 -0.40 16.6 85 2 5 5 4 1 1 0  AGS 902 A 3 2.28 2.38 43.8 -2.03 -0.59 23.2 89 8 5 4 2 0 0 0   4 1.90 2.04 44.6 -1.88 -0.66 20.0 82 4 5 6 3 1 1 0  AGS 903 D 5 1.62 1.85 49.0 -0.57 -0.28 14.0 83 2 5 5 5 1 2 0  AGS 902 A 6 2.08 2.48 53.3 -2.17 -0.43 31.1 81 7 7 2 4 1 1 0   7 1.27 1.27 59.5 -1.33 -0.41 14.9 88 6 2 4 4 0 0 0  AGS 902 A 8 1.89 2.04 62.9 -1.65 -0.50 18.2 79 7 6 7 4 2 2 0  AGS 902 F GOL 906 F GOL 907 F 9 1.71 1.72 65.9 -2.21 -0.34 32.1 82 12 6 3 6 1 1 0   10 1.70 1.71 67.6 -1.85 -0.42 27.4 77 5 8 3 3 3 0 0   11 2.12 2.29 68.2 -1.75 -0.32 27.3 82 7 6 3 6 1 0 0   12 1.57 1.67 69.4 -2.43 -0.68 27.4 82 6 9 6 3 2 1 0  AGS 903 D MG 905 D 13 1.77 1.94 71.2 -0.88 -0.39 14.7 80 2 10 6 6 2 4 0  AGS 902 B 14 1.89 2.03 77.2 -2.22 -0.65 22.3 84 8 7 8 2 1 1 0  AGS 902 A 15 1.78 2.09 81.2 -2.14 -0.43 28.3 79 10 9 3 1 3 2 0  AGS 902 D 16 1.83 2.62 89.3 -1.71 -0.36 27.9 78 10 11 1 6 2 1 0   17 1.29 1.29 95.5 -1.44 -0.41 16.9 85 10 3 8 8 1 3 0  AGS 902 E 18 1.80 2.04 113.1 -0.91 -0.03 18.2 74 12 11 3 3 10 1 0  AGS 901 A 19 1.34 1.34 113.6 -0.72 0.02 15.9 78 12 7 4 6 9 0 0  AGS 902 A 20 1.70 1.88 120.3 -0.46 -0.09 13.3 76 10 8 3 6 7 3 0  AGS 903 C MG 905 C 21 1.91 2.12 120.2 -1.76 -0.40 26.1 81 11 11 6 10 2 0 0  AGS 901 A 22 1.33 1.33 124.3 -1.45 -0.47 20.4 87 13 12 8 10 1 1 0  AGS 901 A AGS 902 A 23 1.70 1.89 125.3 -1.20 -0.28 15.1 80 7 5 8 7 1 6 0  AGS 903 C 24 1.90 2.02 128.2 -1.23 -0.21 17.1 75 14 11 6 3 11 1 0  AGS 902 F GOL 906 F GOL 907 F 25 1.89 1.97 128.6 -1.09 -0.17 17.8 76 13 12 5 3 10 1 0  AGS 902 A 26 1.78 2.08 129.9 -1.78 -0.57 22.3 85 13 15 10 6 2 3 0  AGS 901 A AGS 902 A 27 2.59 2.72 129.6 -1.18 -0.10 18.0 78 16 9 5 2 9 0 0   28 1.77 2.11 172.9 -1.93 -0.61 20.6 84 11 15 17 8 3 3 0  AGS 901 A AGS 902 B 29 1.90 1.97 177.3 -2.13 -0.59 20.6 82 13 13 17 5 3 5 0  AGS 902 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.