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PDBsum entry 5c13

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protein ligands metals Protein-protein interface(s) links
Hydrolase PDB id
5c13

 

 

 

 

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Contents
Protein chains
59 a.a.
Ligands
ALA-ARG-THR-4WQ-
GLN-THR
×4
Metals
_ZN ×8
Waters ×78
PDB id:
5c13
Name: Hydrolase
Title: Crystal structure of taf3 phd finger bound to histone h3c4me3 peptide
Structure: Transcription initiation factor tfiid subunit 3. Chain: a, c, e, g. Fragment: phd finger domain, unp residues 853-915. Synonym: 140 kda tata box-binding protein-associated factor,tbp- associated factor 3,transcription initiation factor tfiid 140 kda subunit,tafii140. Engineered: yes. H3 peptide. Chain: p, d, f, h.
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: taf3. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008. Synthetic: yes. Synthetic construct. Organism_taxid: 32630.
Resolution:
2.10Å     R-factor:   0.225     R-free:   0.280
Authors: H.Li,J.Huang
Key ref: J.Huang and h.li Crystal structure of jarid1a phd finger bound to hist h3c4me3 peptide. Nat commun, .
Date:
12-Jun-15     Release date:   25-Nov-15    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q5VWG9  (TAF3_HUMAN) -  Transcription initiation factor TFIID subunit 3 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
929 a.a.
59 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 

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