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PDBsum entry 5bxo

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protein ligands Protein-protein interface(s) links
Transferase PDB id
5bxo

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
160 a.a.
Ligands
ACE-ARG-GLU-ALA-
GLY-ASP-GLY-ALA-
GLU-NH2
×2
SO4 ×6
DMS ×3
4XP ×2
Waters ×280
PDB id:
5bxo
Name: Transferase
Title: Human tankyrase-2 in complex with macrocyclised extended peptide cp4n2m3
Structure: Tankyrase-2. Chain: a, b. Fragment: residues 488-649. Synonym: tank2,adp-ribosyltransferase diphtheria toxin-like 6,artd6, poly [adp-ribose] polymerase 5b,tnks-2,trf1-interacting ankyrin- related adp-ribose polymerase 2,tankyrase ii,tankyrase-like protein, tankyrase-related protein. Engineered: yes. Tankyrase-2.
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: tnks2, parp5b, tank2, tnkl. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008. Expression_system_variant: c41. Synthetic: yes. Organism_taxid: 9606
Resolution:
1.33Å     R-factor:   0.176     R-free:   0.203
Authors: W.Xu,G.Fischer,M.Hyvonen,L.Itzhaki
Key ref: W.Xu et al. Human tankyrase-2 in complex with extended stapled pe sp4n2m3. To be published, . PubMed id: 28084734
Date:
09-Jun-15     Release date:   29-Jun-16    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q9H2K2  (TNKS2_HUMAN) -  Poly [ADP-ribose] polymerase tankyrase-2 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1166 a.a.
160 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class 2: E.C.2.4.2.-  - ?????
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
   Enzyme class 3: E.C.2.4.2.30  - NAD(+) ADP-ribosyltransferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
      Reaction: NAD+ + (ADP-D-ribosyl)n-acceptor = nicotinamide + (ADP-D- ribosyl)n+1-acceptor + H+
NAD(+)
+ (ADP-D-ribosyl)n-acceptor
= nicotinamide
+ (ADP-D- ribosyl)n+1-acceptor
+ H(+)
Note, where more than one E.C. class is given (as above), each may correspond to a different protein domain or, in the case of polyprotein precursors, to a different mature protein.
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 

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