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PDBsum entry 5bw7

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 5bw7 calculated with MOLE 2.0 PDB id
5bw7
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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7 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.42 2.65 16.0 -0.73 -0.13 15.6 65 0 2 0 2 1 1 0  
2 1.27 1.26 17.3 -0.85 -0.21 11.6 69 0 1 0 2 1 2 0  
3 1.41 1.59 20.9 -1.00 -0.28 11.9 62 1 1 0 1 2 4 0  MAN 6 E NAG 7 E
4 1.28 1.43 23.1 -0.96 -0.24 10.2 66 1 1 0 2 2 4 0  MAN 6 E NAG 7 E
5 1.34 1.46 17.0 -2.10 -0.77 22.9 83 4 2 4 0 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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