PDBsum entry 5bpb Go to PDB code:  Pore analysis for: 5bpb calculated with MOLE 2.0 PDB id 5bpb Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.73 1.73 36.4 -0.79 -0.53 6.9 83 1 1 5 3 2 2 0   2 1.65 2.38 43.8 -0.47 -0.30 4.4 78 0 2 3 1 3 4 0   3 1.65 2.31 48.0 -0.81 -0.44 7.2 83 0 2 5 1 4 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.