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PDBsum entry 5bo1
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Tunnel analysis for: 5bo1 calculated with  MOLE 2.0
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PDB id
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5bo1
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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24 tunnels,
coloured by tunnel radius |
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24 tunnels,
coloured by
tunnel radius
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24 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.09 |
1.09 |
18.7 |
-0.27 |
-0.44 |
9.6 |
82 |
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1 |
1 |
2 |
3 |
1 |
1 |
0 |
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2 |
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1.25 |
1.25 |
22.9 |
-0.16 |
-0.28 |
6.0 |
73 |
1 |
0 |
3 |
3 |
3 |
1 |
0 |
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3 |
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1.24 |
1.24 |
24.0 |
-0.03 |
-0.32 |
5.2 |
79 |
1 |
0 |
2 |
3 |
2 |
1 |
0 |
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4 |
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1.25 |
1.24 |
24.8 |
-0.04 |
-0.31 |
5.0 |
72 |
1 |
0 |
3 |
4 |
2 |
2 |
0 |
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5 |
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1.25 |
1.25 |
26.0 |
-0.03 |
-0.34 |
5.3 |
77 |
1 |
0 |
2 |
4 |
1 |
2 |
0 |
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6 |
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1.48 |
1.47 |
17.1 |
-1.37 |
-0.57 |
19.4 |
93 |
2 |
1 |
2 |
0 |
1 |
0 |
0 |
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7 |
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1.49 |
1.64 |
18.1 |
-1.55 |
-0.63 |
20.9 |
92 |
2 |
2 |
1 |
0 |
1 |
0 |
0 |
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8 |
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1.49 |
1.63 |
23.3 |
-1.68 |
-0.67 |
22.3 |
93 |
3 |
2 |
3 |
0 |
1 |
0 |
0 |
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9 |
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1.49 |
1.64 |
30.2 |
-1.56 |
-0.69 |
19.4 |
89 |
2 |
2 |
2 |
0 |
1 |
0 |
0 |
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10 |
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1.10 |
1.10 |
17.9 |
-0.60 |
-0.51 |
10.3 |
81 |
1 |
1 |
1 |
2 |
0 |
1 |
0 |
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11 |
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1.09 |
1.09 |
18.0 |
-0.41 |
-0.46 |
9.0 |
79 |
1 |
2 |
1 |
2 |
0 |
1 |
0 |
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12 |
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1.12 |
1.12 |
18.6 |
-0.29 |
-0.39 |
8.9 |
80 |
1 |
1 |
2 |
4 |
0 |
1 |
0 |
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13 |
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1.09 |
1.09 |
18.7 |
-0.03 |
-0.32 |
7.0 |
79 |
1 |
2 |
2 |
4 |
0 |
1 |
0 |
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14 |
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1.11 |
1.11 |
22.5 |
0.05 |
-0.31 |
4.8 |
77 |
1 |
0 |
3 |
4 |
1 |
1 |
1 |
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15 |
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1.77 |
1.77 |
16.6 |
-0.94 |
-0.58 |
15.4 |
82 |
1 |
3 |
0 |
2 |
2 |
0 |
0 |
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16 |
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1.21 |
1.27 |
23.3 |
-0.27 |
0.43 |
8.7 |
65 |
2 |
0 |
2 |
3 |
5 |
0 |
0 |
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17 |
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1.45 |
1.54 |
21.1 |
-0.55 |
-0.61 |
2.1 |
101 |
0 |
0 |
7 |
1 |
1 |
0 |
0 |
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18 |
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1.44 |
1.52 |
22.0 |
-0.60 |
-0.63 |
2.3 |
101 |
0 |
0 |
7 |
1 |
1 |
0 |
0 |
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19 |
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1.60 |
1.61 |
15.6 |
-0.58 |
-0.65 |
2.4 |
99 |
0 |
0 |
6 |
1 |
1 |
0 |
0 |
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20 |
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1.57 |
1.65 |
17.2 |
-0.61 |
-0.67 |
2.4 |
101 |
0 |
0 |
7 |
1 |
1 |
0 |
0 |
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21 |
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1.60 |
2.77 |
18.9 |
-0.80 |
-0.68 |
4.4 |
99 |
1 |
0 |
7 |
1 |
1 |
0 |
0 |
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22 |
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1.57 |
2.66 |
19.3 |
-0.72 |
-0.70 |
2.4 |
100 |
0 |
0 |
7 |
1 |
1 |
0 |
0 |
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23 |
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1.53 |
1.62 |
20.5 |
-0.95 |
-0.71 |
4.7 |
100 |
1 |
0 |
8 |
1 |
1 |
0 |
0 |
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24 |
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1.52 |
2.74 |
20.9 |
-0.77 |
-0.73 |
2.3 |
101 |
0 |
0 |
8 |
1 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program