PDBsum entry 5bmm Go to PDB code:  Pore analysis for: 5bmm calculated with MOLE 2.0 PDB id 5bmm Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.71 1.75 36.6 -1.60 -0.41 15.1 79 4 3 3 0 2 2 0  ORN 5 D 2 1.32 1.55 38.7 0.14 -0.02 11.4 73 2 1 2 7 2 1 1  FUM 1 D ALC 2 D PFF 3 D PPN 4 D ORN 5 D 3 1.31 1.54 41.6 0.58 0.15 13.1 74 1 1 1 8 1 0 0  ALC 2 D PFF 3 D PPN 4 D 4 1.21 2.95 28.1 0.59 -0.06 5.1 79 1 1 1 9 2 0 0  PPN 4 C 5 1.32 3.11 33.5 -0.23 -0.24 12.4 82 1 2 3 8 1 0 0  ALC 2 C PFF 3 C PPN 4 C ORN 5 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.