PDBsum entry 5bjs Go to PDB code:  Pore analysis for: 5bjs calculated with MOLE 2.0 PDB id 5bjs Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.85 1.85 31.4 -0.41 -0.24 15.0 80 4 4 1 6 2 1 0   2 1.62 2.11 34.9 -0.96 -0.31 19.5 83 6 3 1 6 2 1 0   3 1.30 1.36 101.6 -1.40 -0.31 21.4 72 6 6 2 2 6 1 2   4 1.31 2.19 137.3 -1.98 -0.30 29.8 77 11 8 3 9 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.