PDBsum entry 5b0z Go to PDB code:  Tunnel analysis for: 5b0z calculated with MOLE 2.0 PDB id 5b0z Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.79 135.8 -0.62 -0.27 14.5 80 11 1 3 12 6 0 0  DT 48 I DT 123 I DA 124 I DT 128 I DC 129 I DT 130 I DG 131 I DT 166 J DT 167 J DC 168 J DG 249 J 2 1.40 2.32 147.5 -1.01 -0.31 18.6 81 16 2 5 11 5 0 0  DT 48 I DA 133 I DG 134 I DA 157 J DC 158 J DC 159 J DT 160 J DA 165 J DT 239 J DG 249 J Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.