PDBsum entry 5az5 Go to PDB code:  Pore analysis for: 5az5 calculated with MOLE 2.0 PDB id 5az5 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   15 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.12 5.16 42.7 -2.95 -0.08 23.5 84 7 3 4 0 2 0 0  NAG 1 L NAG 2 L NAG 1 M NAG 2 M BMA 3 M 2 2.56 2.72 71.4 -2.09 -0.19 26.2 83 8 4 6 2 5 0 0  NAG 1 L NAG 2 L NAG 2 O 3 2.56 2.72 78.6 -2.31 -0.28 29.1 84 11 7 7 2 4 0 0  NAG 1 L NAG 2 L NAG 1 M NAG 2 M BMA 3 M 4 1.15 2.64 109.8 0.34 0.28 12.7 79 7 7 3 9 10 1 0  NAG 912 C MBL 915 C 5 2.16 2.40 27.0 -0.20 0.35 18.4 83 5 1 2 5 2 0 0  NAG 1 I NAG 2 I 6 4.63 4.64 27.6 -1.17 0.06 27.6 87 8 0 2 4 0 0 0   7 1.35 1.39 34.6 -2.14 -0.60 25.5 87 5 5 4 1 1 0 0  NAG 2 I 8 1.32 2.53 36.7 0.07 0.26 4.1 74 2 1 4 3 6 2 1   9 1.21 1.21 39.2 -1.68 -0.38 27.8 84 6 2 2 4 0 0 0   10 1.92 2.01 42.3 -2.61 -0.40 30.6 86 8 4 4 2 1 0 0   11 1.22 1.22 52.7 -1.78 -0.52 26.4 84 8 3 3 4 0 0 0   12 1.22 1.22 52.6 -1.39 -0.37 24.2 85 10 2 4 4 0 0 0   13 1.31 2.52 53.9 0.26 0.08 2.8 69 1 1 5 3 10 2 1  NAG 2 H BMA 3 H 14 1.07 1.58 56.0 -0.09 0.52 12.4 78 4 1 2 6 7 0 0  MBL 901 A NAG 1 F NAG 2 F NAG 2 I 15 1.09 1.60 63.3 -0.78 0.14 18.8 83 6 5 4 7 6 0 0  MBL 901 A NAG 1 F NAG 2 F NAG 1 G NAG 2 G BMA 3 G MAN 4 G 16 1.66 1.95 62.8 -2.18 -0.29 28.4 88 11 3 6 5 0 1 0   17 1.93 2.01 64.9 -2.37 -0.24 26.2 83 8 3 6 1 4 0 0  NAG 1 F NAG 2 F 18 1.07 2.00 65.5 -0.51 0.36 19.3 81 6 5 4 8 6 0 0  MBL 915 A NAG 1 I NAG 2 I NAG 1 J NAG 2 J BMA 3 J 19 2.39 3.82 78.4 -2.91 -0.26 32.7 82 12 4 5 2 3 0 0  NAG 1 F NAG 2 F 20 1.07 1.54 81.8 -0.51 0.14 17.8 84 7 3 4 6 5 1 0  MBL 901 A NAG 2 F 21 1.18 1.53 105.2 -1.20 0.02 24.1 85 16 5 5 8 4 0 0  MBL 901 A NAG 2 F 22 1.73 2.05 25.1 -3.11 -0.60 37.3 85 5 3 2 1 0 1 0   23 1.24 1.32 30.7 1.90 0.55 3.8 72 2 0 0 6 2 0 2   24 1.21 3.90 32.3 1.99 0.69 6.6 82 3 1 1 10 2 0 0   25 1.24 3.81 32.4 1.88 0.66 6.6 79 2 1 1 8 2 0 2   26 1.34 1.76 33.2 2.23 0.82 2.0 65 1 0 0 9 3 0 2   27 1.25 3.89 33.8 2.39 0.94 4.4 75 2 1 1 13 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.