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PDBsum entry 5awd
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Tunnel analysis for: 5awd calculated with  MOLE 2.0
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PDB id
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5awd
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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2 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.23 |
2.76 |
17.4 |
0.17 |
0.05 |
7.7 |
73 |
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1 |
1 |
3 |
1 |
5 |
0 |
0 |
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NAG 1 B NAG 2 B BMA 3 B MAN 5 B
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2 |
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1.34 |
2.58 |
17.4 |
0.16 |
0.31 |
1.7 |
64 |
0 |
0 |
2 |
0 |
4 |
2 |
1 |
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3 |
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1.24 |
2.74 |
20.0 |
0.76 |
0.31 |
3.8 |
71 |
0 |
2 |
3 |
0 |
6 |
0 |
0 |
NAG 1 B
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4 |
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1.30 |
2.23 |
24.0 |
-0.45 |
0.00 |
8.1 |
80 |
0 |
4 |
6 |
0 |
6 |
0 |
0 |
NAG 1 B
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5 |
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1.15 |
2.67 |
20.0 |
0.58 |
0.05 |
4.2 |
70 |
0 |
1 |
2 |
5 |
1 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program