PDBsum entry 5awb Go to PDB code:  Tunnel analysis for: 5awb calculated with MOLE 2.0 PDB id 5awb Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.22 2.19 18.7 -1.68 -0.32 12.8 77 1 3 3 2 3 0 0  NAG 1 B NAG 2 B BMA 3 B 2 1.33 2.63 50.7 -0.07 0.05 4.3 76 0 3 8 1 8 2 1  NAG 1 B 3 1.15 2.64 18.5 0.43 -0.05 5.8 71 0 1 2 5 1 1 0   4 1.15 3.48 18.0 0.85 0.27 5.7 74 1 2 2 5 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.