PDBsum entry 5ari Go to PDB code:  Pore analysis for: 5ari calculated with MOLE 2.0 PDB id 5ari Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.80 2.80 25.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   2 2.69 2.69 39.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   3 2.23 2.23 45.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   4 2.99 2.99 48.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   5 4.94 4.94 50.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   6 2.31 2.31 51.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   7 1.21 1.21 57.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   8 3.79 3.79 63.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   9 2.91 2.91 68.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   10 1.23 1.23 69.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   11 2.06 2.06 74.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   12 2.24 2.24 79.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   13 3.04 3.04 81.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   14 2.33 2.33 92.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   15 2.06 2.06 98.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   16 2.10 2.10 100.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   17 1.34 1.34 100.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   18 2.25 2.25 105.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   19 2.66 2.66 106.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   20 2.30 2.30 110.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   21 2.44 2.44 113.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   22 1.94 1.94 120.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   23 2.14 2.14 125.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   24 2.09 2.09 133.5 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   25 1.28 1.28 142.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   26 1.96 1.96 157.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   27 2.66 2.66 158.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   28 1.42 1.42 169.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   29 2.35 2.35 182.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   30 2.07 2.07 216.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.