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PDBsum entry 5an8

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 5an8 calculated with MOLE 2.0 PDB id
5an8
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.53 1.53 26.5 0.78 -0.01 4.0 72 1 1 1 7 1 0 1  
2 1.41 1.50 30.7 -0.03 -0.22 9.3 74 1 2 2 6 0 1 1  
3 1.39 1.52 37.9 0.27 0.03 11.0 68 0 3 1 8 3 1 1  
4 1.28 2.15 64.9 -0.99 -0.29 13.4 79 5 2 5 4 4 1 0  
5 1.52 2.72 66.0 -1.11 -0.18 16.9 79 6 3 3 6 4 2 2  
6 1.44 1.63 66.2 -0.69 -0.18 14.7 79 5 4 1 6 4 0 2  
7 1.34 1.72 100.9 0.47 -0.10 3.3 83 1 0 7 11 1 3 1  
8 1.53 1.61 114.5 -0.14 0.08 12.4 76 6 6 3 10 6 0 2  
9 1.35 1.86 129.7 -0.41 -0.17 11.0 77 9 2 7 9 8 2 1  
10 1.35 1.51 131.7 -0.68 -0.21 15.3 80 7 6 7 9 5 0 1  
11 1.21 2.14 146.9 -0.45 -0.04 11.1 79 9 3 5 10 9 0 1  
12 1.39 1.57 148.3 -0.59 -0.16 13.5 74 7 5 4 13 4 1 3  
13 1.58 2.09 147.7 -0.64 -0.25 13.5 78 11 5 6 11 6 2 1  
14 1.59 1.76 148.6 -0.62 -0.25 13.0 78 10 5 6 11 6 2 1  
15 1.44 1.99 164.9 -0.62 -0.11 13.8 79 11 6 4 12 7 0 1  
16 1.44 1.91 167.5 -0.10 -0.13 9.2 81 6 4 8 16 4 3 3  
17 1.48 1.57 168.1 -0.53 -0.25 10.9 74 7 3 7 16 5 1 3  
18 1.46 1.63 179.8 -0.69 -0.13 13.1 78 10 7 4 12 9 0 1  
19 1.39 1.38 186.5 -0.21 0.10 11.9 84 13 5 9 27 9 0 1  
20 1.48 2.66 194.9 -0.72 -0.24 14.1 75 10 6 7 15 5 1 4  
21 1.21 1.38 228.0 -0.31 -0.09 11.0 81 10 7 7 27 8 2 3  
22 1.21 1.39 230.8 -0.41 -0.07 11.8 81 10 9 6 25 10 1 3  
23 1.47 2.74 227.5 -1.05 -0.26 14.7 83 22 6 11 15 8 4 0  
24 1.44 1.84 243.1 -0.60 -0.29 11.6 80 9 3 14 20 4 4 2  
25 1.36 2.36 268.4 -0.51 -0.05 13.7 83 20 7 9 27 10 1 1  
26 1.35 1.27 274.8 -0.44 -0.02 13.3 82 19 6 9 29 10 1 1  
27 1.32 2.29 280.7 -0.60 -0.12 12.4 84 20 7 10 27 10 2 1  
28 1.28 1.23 293.1 -0.18 -0.05 10.3 84 17 6 11 39 8 2 2  
29 1.42 1.42 288.7 -0.42 -0.23 11.1 83 11 6 17 30 6 7 2  
30 1.24 1.32 315.7 -0.38 -0.17 10.7 84 12 6 16 33 7 5 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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