PDBsum entry 5am7 Go to PDB code:  Tunnel analysis for: 5am7 calculated with MOLE 2.0 PDB id 5am7 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.90 26.5 -0.92 -0.14 14.3 83 2 2 2 3 2 1 0   2 1.26 1.89 26.8 -0.74 -0.07 12.9 82 2 2 2 3 2 1 0   3 1.29 2.29 18.0 1.10 -0.08 3.6 72 0 2 1 6 0 0 0   4 1.32 2.60 18.4 -0.47 0.04 15.8 82 1 2 1 5 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.