PDBsum entry 5aiu Go to PDB code:  Tunnel analysis for: 5aiu calculated with MOLE 2.0 PDB id 5aiu Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.93 27.5 0.49 0.27 4.7 93 1 1 1 5 1 0 0   2 1.19 1.22 17.5 -1.03 -0.46 14.5 88 2 0 2 2 0 0 0   3 1.18 1.22 20.2 -0.70 -0.37 5.9 83 1 0 3 3 1 1 0   4 1.54 1.54 15.0 -0.34 -0.21 12.4 78 2 1 0 4 2 0 0   5 1.55 1.65 15.4 -0.37 -0.10 10.1 72 2 1 0 3 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.