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PDBsum entry 5afu
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Tunnel analysis for: 5afu calculated with  MOLE 2.0
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PDB id
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5afu
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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5 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.35 |
1.63 |
16.8 |
-1.67 |
-0.47 |
26.1 |
82 |
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3 |
1 |
1 |
4 |
0 |
1 |
0 |
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2 |
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1.35 |
1.63 |
17.8 |
-0.40 |
0.00 |
23.4 |
76 |
3 |
2 |
0 |
5 |
0 |
1 |
0 |
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3 |
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1.68 |
1.68 |
15.3 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
UNK 19 N UNK 205 N UNK 209 N UNK 210 N UNK 411 N
UNK 412 N UNK 414 N UNK 415 N
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4 |
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1.13 |
1.13 |
15.1 |
0.44 |
-0.27 |
5.4 |
84 |
1 |
0 |
0 |
3 |
1 |
0 |
0 |
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5 |
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1.22 |
2.47 |
18.3 |
0.57 |
-0.08 |
7.2 |
89 |
0 |
1 |
2 |
5 |
2 |
0 |
0 |
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6 |
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1.22 |
1.62 |
15.8 |
-1.56 |
0.01 |
13.8 |
71 |
1 |
1 |
1 |
1 |
2 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program