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PDBsum entry 5aep

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protein ligands links
Transferase PDB id
5aep

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
289 a.a.
Ligands
QUP
Waters ×154
PDB id:
5aep
Name: Transferase
Title: Novel pyrrole carboxamide inhibitors of jak2 as potential treatment of myeloproliferative disorders
Structure: Tyrosine-protein kinase jak2. Chain: a. Fragment: kinase domain, residues 835-1132. Synonym: janus kinase 2, jak-2. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Expression_system_cell_line: sf21.
Resolution:
1.95Å     R-factor:   0.173     R-free:   0.213
Authors: G.Canevari,J.Bertrand,M.G.Brasca,M.Nesi,N.Amboldi,N.Avanzi,S.Bindi, D.Casero,M.Ciomei,N.Colombo,S.Cribioli,G.Fachin,E.R.Felder, A.Galvani,A.Isacchi,I.Motto,A.Panzeri,P.Gnocchi,D.Donati
Key ref: M.G.Brasca et al. (2015). Novel pyrrole carboxamide inhibitors of JAK2 as potential treatment of myeloproliferative disorders. Bioorg Med Chem Lett, 23, 2387-2407. PubMed id: 25882525 DOI: 10.1016/j.bmc.2015.03.059
Date:
08-Jan-15     Release date:   29-Apr-15    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
O60674  (JAK2_HUMAN) -  Tyrosine-protein kinase JAK2 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1132 a.a.
289 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.2  - non-specific protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1016/j.bmc.2015.03.059 Bioorg Med Chem Lett 23:2387-2407 (2015)
PubMed id: 25882525  
 
 
Novel pyrrole carboxamide inhibitors of JAK2 as potential treatment of myeloproliferative disorders.
M.G.Brasca, P.Gnocchi, M.Nesi, N.Amboldi, N.Avanzi, J.Bertrand, S.Bindi, G.Canevari, D.Casero, M.Ciomei, N.Colombo, S.Cribioli, G.Fachin, E.R.Felder, A.Galvani, A.Isacchi, I.Motto, A.Panzeri, D.Donati.
 
  ABSTRACT  
 
Compound 1, a hit from the screening of our chemical collection displaying activity against JAK2, was deconstructed for SAR analysis into three regions, which were explored. A series of compounds was synthesized leading to the identification of the potent and orally bioavailable JAK2 inhibitor 16 (NMS-P830), which showed an encouraging tumour growth inhibition in SET-2 xenograft tumour model, with evidence for JAK2 pathway suppression demonstrated by in vivo pharmacodynamic effects.
 

 

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