PDBsum entry 5aek Go to PDB code:  Pore analysis for: 5aek calculated with MOLE 2.0 PDB id 5aek Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 3.17 88.4 -1.85 -0.49 21.8 85 7 5 8 5 1 1 0   2 1.41 1.63 105.9 -1.65 -0.50 21.1 88 6 7 7 6 0 0 0   3 1.19 1.34 108.8 -1.89 -0.36 24.5 80 12 5 6 6 1 1 0   4 1.41 1.62 122.6 -1.63 -0.52 21.4 85 8 6 5 4 1 0 0   5 1.22 1.33 124.6 -1.84 -0.43 22.0 82 12 5 6 6 1 1 0   6 1.31 3.91 133.7 -2.07 -0.46 24.6 78 16 5 12 5 2 1 0   7 1.28 1.60 100.7 -1.17 -0.22 16.2 75 7 5 7 9 2 0 0   8 1.26 1.29 35.1 -1.42 -0.45 17.0 89 3 2 4 4 1 0 0   9 1.66 2.29 40.7 -1.04 -0.22 19.5 69 3 1 2 4 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.