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PDBsum entry 5ad2

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 5ad2 calculated with MOLE 2.0 PDB id
5ad2
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.86 1.86 26.4 0.49 0.53 6.3 69 0 2 3 4 3 1 0  ETU 1169 A
2 1.97 2.53 30.4 0.78 0.69 5.2 74 0 1 3 7 2 1 0  ETU 1169 A
3 1.82 1.82 32.7 0.50 0.82 3.7 69 0 1 2 6 2 3 0  ETU 1169 A
4 1.44 1.51 38.6 0.63 0.34 4.8 71 0 2 3 7 4 3 1  ETU 1169 A
5 1.40 1.64 47.3 0.72 0.56 3.3 70 0 2 2 9 4 4 1  ETU 1169 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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