spacer
spacer

PDBsum entry 5a6c

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 5a6c calculated with MOLE 2.0 PDB id
5a6c
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.39 28.6 -0.96 -0.23 14.7 86 3 0 3 4 1 0 1  
2 2.01 2.36 30.9 -0.88 -0.42 14.5 77 4 0 2 1 0 1 1  
3 1.52 1.54 62.0 -1.87 -0.52 25.1 75 7 8 3 2 2 0 1  
4 1.20 1.70 90.9 -0.87 -0.19 18.2 77 5 3 5 10 4 0 1  
5 1.53 1.57 107.0 -1.81 -0.52 22.1 80 8 6 5 4 3 0 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer