PDBsum entry 5a5t Go to PDB code:  Pore analysis for: 5a5t calculated with MOLE 2.0 PDB id 5a5t Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   28 pores, coloured by radius 28 pores, coloured by radius 28 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.58 1.62 27.6 -1.39 -0.40 15.9 78 6 0 3 3 0 0 0   2 1.17 2.31 37.7 0.85 0.38 8.5 76 4 2 2 14 1 1 0   3 1.46 1.61 65.1 -0.12 -0.09 17.9 81 1 5 2 12 0 1 2   4 1.71 1.68 141.4 -1.07 -0.23 17.1 85 10 8 14 12 3 1 0   5 1.90 3.23 139.7 -0.83 0.05 19.7 81 12 6 6 14 3 1 0   6 1.73 2.34 162.3 -1.60 -0.20 19.5 85 14 7 14 12 3 3 0   7 1.74 1.74 163.1 -1.26 -0.23 16.8 76 9 4 11 12 4 1 0   8 1.20 1.56 182.6 -0.84 -0.17 14.6 83 11 8 15 18 6 1 0   9 1.74 3.22 190.1 -0.81 -0.10 17.5 82 13 6 11 19 2 4 0   10 1.43 1.44 202.2 -1.11 -0.27 14.4 84 13 10 23 24 2 4 0   11 1.88 2.47 199.7 -0.93 -0.03 22.1 82 16 11 7 19 4 1 0   12 1.16 1.17 207.2 -0.67 -0.06 19.3 81 12 12 9 21 4 3 1   13 1.17 2.34 211.7 -0.75 0.04 18.7 79 21 13 11 18 7 1 5   14 1.71 2.98 250.2 -0.89 -0.12 20.0 82 17 11 12 25 3 4 0   15 1.25 2.95 274.7 -0.58 -0.07 17.0 81 18 15 10 24 6 6 2   16 1.25 1.50 278.1 -0.49 -0.06 15.9 82 17 14 13 30 5 6 1   17 1.32 2.56 296.2 -0.94 -0.16 17.0 83 21 17 18 22 6 8 2   18 1.20 1.39 296.2 -0.91 -0.17 16.7 84 20 15 21 29 5 8 1   19 1.19 1.20 306.6 -0.94 -0.21 20.4 80 20 20 10 27 6 7 0   20 1.49 1.75 300.7 -1.14 -0.18 16.7 82 17 14 16 25 9 1 0   21 1.50 1.75 309.9 -1.29 -0.16 19.1 81 23 13 17 19 9 1 1   22 1.55 2.38 328.2 -1.05 -0.05 17.8 80 25 16 17 23 11 1 3   23 1.92 2.06 325.7 -1.05 -0.14 16.1 83 18 16 20 20 10 2 0   24 1.28 1.27 327.9 -1.16 -0.15 18.1 78 27 17 21 29 10 3 1   25 1.65 1.86 329.6 -1.23 -0.13 15.8 81 15 14 18 19 11 4 0   26 1.53 2.67 334.7 -0.63 -0.08 18.5 82 22 21 11 29 7 6 2   27 1.25 1.52 365.6 -1.23 -0.20 17.4 82 24 19 24 30 9 4 0   28 1.17 1.22 373.9 -0.82 -0.07 19.8 77 28 23 14 40 11 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.