PDBsum entry 5a40 Go to PDB code:  Pore analysis for: 5a40 calculated with MOLE 2.0 PDB id 5a40 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.36 36.0 0.11 -0.30 3.9 89 2 0 2 5 1 2 0   2 2.01 2.01 42.5 0.30 -0.12 9.1 87 1 4 2 6 1 1 0   3 1.29 1.36 60.3 0.36 -0.26 7.4 85 3 4 1 7 1 1 0   4 1.53 3.27 60.7 -0.09 -0.03 8.4 81 0 2 2 8 3 3 0   5 1.29 1.36 78.5 0.04 -0.18 7.0 81 2 2 1 9 3 3 0   6 1.30 1.45 58.3 -0.43 -0.52 12.3 83 1 2 0 5 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.