PDBsum entry 5a01 Go to PDB code:  Pore analysis for: 5a01 calculated with MOLE 2.0 PDB id 5a01 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   15 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.28 4.04 35.0 -2.62 -0.42 33.5 82 8 6 5 2 0 0 0   2 3.30 4.13 39.7 -2.56 -0.41 29.6 81 9 4 5 2 1 0 0   3 3.11 3.21 42.0 -1.65 -0.31 23.6 77 7 4 5 4 0 1 1   4 3.08 3.10 51.5 -2.30 -0.56 22.9 79 8 5 5 3 0 1 0   5 1.69 2.70 55.6 -0.81 0.13 21.2 69 9 4 0 6 3 1 1   6 1.71 2.87 56.2 -0.86 0.03 19.4 73 8 4 2 5 3 1 1   7 3.11 3.15 56.5 -2.23 -0.49 26.5 79 10 7 5 3 0 1 0   8 1.82 2.07 79.3 -1.57 -0.33 18.9 76 9 3 4 5 1 2 0   9 1.64 2.58 115.4 -1.52 -0.25 19.0 75 9 6 7 6 4 2 1   10 1.35 1.82 123.7 -1.55 -0.25 24.0 75 17 12 8 10 3 3 1   11 1.46 1.45 26.1 1.44 0.32 4.2 89 0 1 3 8 0 0 1   12 1.79 1.99 28.7 -1.16 0.03 26.5 79 6 3 0 4 1 0 0   13 1.78 2.05 27.6 -1.31 -0.01 26.7 79 7 2 0 4 1 0 0   14 1.77 1.98 30.9 -0.81 0.06 23.0 80 7 3 0 6 1 0 0   15 1.78 1.95 27.5 -1.28 0.01 26.8 79 7 2 0 4 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.