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PDBsum entry 5ejj

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protein Protein-protein interface(s) links
Hydrolase PDB id
5ejj

 

 

 

 

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Contents
Protein chains
517 a.a.
Waters ×223
PDB id:
5ejj
Name: Hydrolase
Title: Crystal structure of ufsp from c.Elegans
Structure: Ufm1-specific protease. Chain: a, b. Synonym: ufsp,odorant response abnormal protein 8. Engineered: yes
Source: Caenorhabditis elegans. Organism_taxid: 6239. Gene: odr-8, ufsp-2, f38a5.1. Expressed in: escherichia coli. Expression_system_taxid: 562. Expression_system_cell_line: bl21ril.
Resolution:
2.80Å     R-factor:   0.207     R-free:   0.237
Authors: K.Kim,B.Ha,E.E.Kim
Key ref: B.H.Ha et al. (2016). The MPN domain of Caenorhabditis elegans UfSP modulates both substrate recognition and deufmylation activity. Biochem Biophys Res Commun, 476, 450-456. PubMed id: 27240952 DOI: 10.1016/j.bbrc.2016.05.143
Date:
02-Nov-15     Release date:   18-Jan-17    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q94218  (UFSP_CAEEL) -  Ufm1-specific protease from Caenorhabditis elegans
Seq:
Struc:
 
Seq:
Struc:
589 a.a.
517 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.3.4.22.-  - ?????
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
DOI no: 10.1016/j.bbrc.2016.05.143 Biochem Biophys Res Commun 476:450-456 (2016)
PubMed id: 27240952  
 
 
The MPN domain of Caenorhabditis elegans UfSP modulates both substrate recognition and deufmylation activity.
B.H.Ha, K.H.Kim, H.M.Yoo, W.Lee, E.EunKyeong Kim.
 
  ABSTRACT  
 
Ubiquitin-fold modifier 1 (Ufm1) specific protease (UfSP) is a novel cysteine protease that activates Ufm1 from its precursor by processing the C-terminus to expose the conserved Gly necessary for substrate conjugation and de-conjugates Ufm1 from the substrate. There are two forms: UfSP1 and UfSP2, the later with an additional domain at the N-terminus. Ufm1 and both the conjugating and deconjugating enzymes are highly conserved. However, in Caenorhabditis elegans there is one UfSP which has extra 136 residues at the N terminus compared to UfSP2. The crystal structure of cUfSP reveals that these additional residues display a MPN fold while the rest of the structure mimics that of UfSP2. The MPN domain does not have the metalloprotease activity found in some MPN-domain containing protein, rather it is required for the recognition and deufmylation of the substrate of cUfSP, UfBP1. In addition, the MPN domain is also required for localization to the endoplasmic reticulum.
 

 

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