spacer
spacer

PDBsum entry 4zwc

Go to PDB code: 
Top Page protein ligands tunnels links
Tunnel analysis for: 4zwc calculated with MOLE 2.0 PDB id
4zwc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.35 1.44 22.8 -0.69 -0.26 3.8 88 0 1 3 2 2 0 0  
2 1.36 1.46 29.1 -0.48 -0.28 6.0 88 1 2 3 3 1 1 0  
3 1.32 1.42 33.3 -0.45 -0.07 2.2 91 0 0 5 3 2 1 0  GLC 2 D
4 1.18 1.23 22.7 -0.81 -0.44 10.7 82 1 1 2 2 2 1 0  
5 1.18 1.18 23.7 -0.76 -0.46 10.0 82 1 1 2 2 2 1 0  
6 1.20 1.38 25.6 1.42 0.54 6.5 83 3 0 0 8 1 2 0  OLC 502 A
7 1.18 1.86 25.9 1.37 0.55 7.1 83 3 0 0 8 1 2 0  OLC 502 A
8 1.20 1.20 16.7 0.00 0.09 8.0 63 1 0 0 4 1 1 1  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer