PDBsum entry 4zun

Tunnel analysis for: 4zun calculated with

MOLE 2.0

PDB id

4zun

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

3 tunnels, coloured by tunnel radius

6 tunnels, coloured by tunnel radius

6 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.44

1.53

23.5

-1.02

0.33

14.8

70

4

2

0

1

5

1

0

ZN 404 B SS9 405 B

2

1.58

1.75

21.1

-0.94

0.52

15.2

68

4

1

0

1

5

1

1

SS9 401 A ZN 405 A

3

1.39

1.54

24.7

-0.94

-0.15

9.8

80

3

1

2

3

2

1

0

GOL 407 B

4

1.40

2.40

27.7

-0.77

-0.09

7.2

79

2

2

3

3

2

2

0

GOL 407 B

5

1.40

1.51

25.5

-1.06

-0.19

11.8

82

2

2

2

4

2

1

0

6

1.45

2.09

15.4

0.02

0.31

7.4

73

0

2

0

4

3

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.