spacer
spacer

PDBsum entry 4ztl

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 4ztl calculated with MOLE 2.0 PDB id
4ztl
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
8 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.25 1.45 29.6 -0.70 -0.19 14.7 85 2 3 3 3 0 3 0  
2 1.25 1.44 34.9 -1.68 -0.19 13.2 81 2 2 6 2 4 3 0  
3 1.25 1.43 36.0 -1.47 -0.48 20.1 79 2 4 2 3 1 2 0  
4 1.24 1.44 39.2 -1.38 -0.37 15.3 83 2 3 3 3 2 2 0  
5 1.25 1.44 40.2 -1.38 -0.34 17.1 79 4 3 3 3 2 4 0  4S1 501 D
6 1.26 1.43 40.4 -1.27 -0.31 16.9 80 2 5 2 4 2 3 0  4S1 501 A
7 1.26 1.42 44.8 -1.24 -0.16 13.9 79 3 3 3 3 2 5 0  4S1 501 C
8 1.25 1.42 45.5 -1.77 -0.48 13.2 82 1 6 5 2 2 3 0  
9 1.27 1.41 63.5 -1.33 -0.12 14.3 83 4 3 4 5 3 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer