PDBsum entry 4zt6

Tunnel analysis for: 4zt6 calculated with

MOLE 2.0

PDB id

4zt6

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

5 tunnels, coloured by tunnel radius

7 tunnels, coloured by tunnel radius

7 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.12

1.96

33.3

-1.60

0.08

23.0

83

5

2

3

5

3

0

0

MET 801 A

2

1.22

1.86

77.0

-1.93

-0.19

23.7

81

7

5

4

3

4

0

0

MET 801 A DMS 802 A

3

1.32

1.53

18.7

-0.61

0.11

14.8

76

2

3

0

2

3

0

0

4RD 802 B

4

1.36

2.59

17.5

0.03

0.25

7.9

77

1

0

1

5

1

1

1

5

1.71

2.08

16.1

0.12

-0.27

8.3

84

0

2

1

1

2

0

0

6

1.32

2.98

15.0

-1.72

-0.17

29.6

83

5

1

0

2

0

0

0

7

1.50

1.57

19.2

-0.96

-0.35

9.8

75

1

1

1

2

1

1

0

CAS 470 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.