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PDBsum entry 4zqr

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4zqr calculated with MOLE 2.0 PDB id
4zqr
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.23 3.01 38.0 0.13 0.17 18.1 87 4 4 2 12 0 0 1  
2 1.24 2.79 39.3 0.04 0.16 18.8 88 4 4 2 12 0 0 1  
3 1.71 1.74 31.8 -1.21 -0.37 17.7 88 4 4 6 3 1 0 1  PO4 601 A
4 1.49 1.49 34.5 -0.38 -0.29 11.5 84 2 3 3 8 1 0 1  PO4 603 D
5 1.47 1.47 35.4 -0.76 -0.33 13.9 84 3 4 4 6 1 0 1  PO4 603 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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