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PDBsum entry 4zmj

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Pore analysis for: 4zmj calculated with MOLE 2.0 PDB id
4zmj
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.11 1.37 38.7 2.13 0.75 3.2 77 2 0 3 10 5 0 0  NAG 609 G NAG 613 G
2 1.25 1.90 54.7 -0.29 -0.27 6.1 84 2 1 6 8 2 1 0  BMA 3 A MAN 4 A MAN 5 A
3 1.36 1.75 61.7 -1.11 -0.26 12.1 86 3 1 7 5 2 0 0  
4 1.55 1.69 66.5 0.11 -0.11 6.4 83 3 0 4 7 3 2 0  BMA 3 A MAN 4 A MAN 5 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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