PDBsum entry 4zly Go to PDB code:  Tunnel analysis for: 4zly calculated with MOLE 2.0 PDB id 4zly Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.83 2.06 23.1 0.57 -0.04 7.4 79 1 1 2 6 1 0 1  4RU 705 A 2 1.37 3.51 25.7 0.87 0.13 7.9 79 1 1 2 7 2 0 1  4RU 705 A 3 1.82 2.07 28.4 -0.28 -0.15 14.5 79 4 1 1 6 2 0 0  4RU 705 A 4 1.37 3.52 31.0 -0.08 -0.03 15.0 79 4 1 1 7 3 0 0  4RU 705 A 5 1.77 1.97 44.2 -0.56 -0.25 12.9 81 3 2 4 5 4 1 0  4RU 705 A 6 1.38 3.45 46.7 -0.50 -0.20 13.6 80 4 2 4 6 5 1 0  4RU 705 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.