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PDBsum entry 4ziw

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Pore analysis for: 4ziw calculated with MOLE 2.0 PDB id
4ziw
Pores calculated on whole structure Pores calculated excluding ligands

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31 pores, coloured by radius 29 pores, coloured by radius 29 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.22 1.36 30.8 0.48 -0.06 6.3 80 0 1 2 6 1 1 0  
2 1.56 2.05 112.8 -1.52 -0.48 11.5 87 5 8 22 9 4 2 0  
3 1.34 3.59 114.8 -0.12 0.18 20.6 79 7 5 0 13 3 1 0  
4 1.23 1.27 145.2 0.19 -0.14 10.2 89 3 7 8 18 2 5 0  
5 1.42 1.44 185.0 -0.38 -0.01 11.9 80 6 8 9 19 11 3 0  
6 1.21 1.26 185.9 -0.17 -0.12 8.6 84 8 7 19 21 7 4 1  
7 1.20 1.47 185.9 -0.42 -0.11 13.4 84 9 12 13 22 7 3 0  
8 1.23 1.28 185.9 -1.82 -0.37 24.6 78 14 10 8 6 6 4 0  LMT 2000 D
9 1.21 1.20 187.7 -0.11 0.08 9.7 80 8 3 13 23 8 5 0  LMT 2000 D
10 1.26 1.30 199.7 0.12 -0.01 8.7 83 4 10 13 21 8 3 1  
11 1.55 1.70 222.0 -1.28 -0.44 14.1 86 10 14 26 19 7 5 0  
12 1.60 1.71 237.4 -1.12 -0.46 12.0 87 9 12 33 17 10 5 0  
13 1.24 1.32 260.6 0.36 0.16 5.7 80 4 5 15 26 14 7 1  
14 1.56 2.30 256.3 -0.99 -0.20 14.4 80 16 8 17 21 7 6 0  
15 1.21 1.24 294.9 0.12 -0.06 9.0 82 7 14 14 35 15 3 0  
16 1.23 1.21 299.2 -0.32 -0.14 12.8 83 11 18 20 35 14 4 0  
17 1.87 2.21 309.8 -1.40 -0.25 20.5 80 22 16 18 22 7 3 0  
18 1.11 1.07 327.5 0.19 0.17 10.0 79 11 10 11 41 11 8 1  LMT 2000 D
19 1.44 1.49 352.2 -0.62 -0.17 14.0 81 14 17 18 31 18 5 0  
20 1.13 1.26 366.7 -0.24 -0.11 13.9 84 15 19 15 46 12 5 0  
21 1.29 1.44 373.3 -0.42 0.03 16.7 80 18 19 11 38 11 6 1  
22 1.29 1.44 380.5 -0.63 -0.26 12.8 85 13 20 28 35 13 6 1  
23 1.27 1.41 394.1 -0.79 -0.25 12.8 84 18 13 32 37 14 8 0  LMT 2000 D
24 1.18 1.42 446.4 -0.13 -0.10 11.7 83 15 24 18 52 16 5 1  
25 1.62 1.79 434.8 -1.15 -0.31 17.1 84 25 21 32 33 13 5 0  
26 1.31 1.25 505.7 -0.67 -0.15 16.5 82 27 26 21 51 17 5 0  
27 1.25 1.28 527.6 -0.34 -0.15 11.7 81 15 21 20 44 20 7 1  
28 1.25 1.32 541.2 -0.48 -0.13 11.8 80 20 14 26 46 21 9 0  LMT 2000 D
29 1.71 1.72 25.1 -1.56 -0.38 26.0 81 5 4 0 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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