PDBsum entry 4zfl

Pore analysis for: 4zfl calculated with

MOLE 2.0

PDB id

4zfl

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

7 pores, coloured by radius

15 pores, coloured by radius

15 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

2.30

2.51

31.6

-1.62

-0.60

18.9

85

5

5

4

2

0

4

0

2

1.29

1.69

34.9

-1.90

-0.51

24.0

86

4

3

2

1

0

0

0

4NK 301 J

3

2.13

2.32

35.7

-0.61

-0.64

7.2

86

1

4

3

3

1

2

0

GOL 302 K

4

2.33

2.37

39.5

-2.14

-0.65

26.9

85

6

7

4

2

0

4

0

5

2.01

4.34

47.0

-1.97

-0.63

23.7

87

6

7

6

2

0

4

0

6

1.96

2.65

49.9

-0.57

-0.50

8.1

79

2

3

3

6

1

2

0

GOL 302 K

7

2.22

2.41

62.0

-1.08

-0.59

13.6

85

3

4

4

5

1

3

0

GOL 302 K

8

1.33

1.81

82.5

-0.99

-0.37

14.3

89

5

3

3

4

0

1

0

4NK 301 C

9

2.31

2.42

94.0

-0.87

-0.51

13.8

80

7

6

4

8

0

6

0

10

1.39

1.82

96.5

-1.62

-0.51

18.5

86

9

6

7

4

0

4

0

4NK 301 C

11

2.09

2.32

99.0

-1.15

-0.52

15.1

83

7

9

6

7

1

6

0

12

1.45

1.55

166.5

-1.44

-0.52

19.5

82

13

10

8

10

0

6

0

4NK 301 C

13

1.10

1.10

30.2

-1.61

-0.43

21.6

84

6

2

2

3

0

1

0

4NK 301 L

14

2.33

2.42

34.2

-1.67

-0.60

19.3

85

5

5

4

2

0

4

0

15

1.94

4.32

44.4

-2.09

-0.61

25.6

85

8

7

5

2

0

4

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.