PDBsum entry 4zdg Go to PDB code:  Tunnel analysis for: 4zdg calculated with MOLE 2.0 PDB id 4zdg Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.51 1.70 18.4 0.80 0.09 1.9 73 0 0 0 2 5 0 0   2 1.63 2.47 20.0 -0.07 0.42 4.0 74 1 0 2 4 4 2 0   3 1.63 2.54 25.3 -0.20 0.27 5.9 75 1 0 1 4 4 1 0   4 1.41 2.78 22.9 -1.02 -0.54 7.7 87 0 3 3 1 4 0 0   5 1.38 1.38 24.3 -0.91 -0.32 5.8 90 2 0 5 1 2 0 0   6 1.24 2.21 19.7 1.76 0.69 1.2 69 0 0 1 7 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.